PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023883953.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ZF-HD
Protein Properties Length: 322aa    MW: 35093.5 Da    PI: 8.3958
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023883953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.13.9e-3291148260
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                     ++vrY+eCl+NhAas+Gg+++DGCgEfmps geeg+ +alkCaAC+CHRnFHR+ev+ e
  XP_023883953.1  91 ATVRYRECLRNHAASTGGNVFDGCGEFMPS-GEEGSLEALKCAACDCHRNFHRKEVNGE 148
                     579**************************9.999*********************9765 PP
2Homeobox14.37.3e-05235295157
                     TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +r Rt+ft+eq + + e+ e    + ++ ++ee  +L +++g++ ++ kvW +N +  +kk
  XP_023883953.1 235 KRFRTKFTPEQKDKMLEFAEkvgwRIQKQDEEEVVKLCAEIGVKRQVLKVWMHNNKNSMKK 295
                     789**********9987666666668999***************************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MEMKAQEKEL GTPGSLSYGG HLIGGSLEVE RRRDGFHGGS GTTSRSRTQS LAPQQHHPSQ  60
ARVTVTVPDP VTSATIAPML GRSNSNPHSA ATVRYRECLR NHAASTGGNV FDGCGEFMPS  120
GEEGSLEALK CAACDCHRNF HRKEVNGETQ FSPGSRRSIV LSPLQIPPLS SPAGVLHHQK  180
FSMGFHTNPT APIVQPMNVA YGGGGGGTES SSEDLNVFHS NAEAMPQPPF TVSKKRFRTK  240
FTPEQKDKML EFAEKVGWRI QKQDEEEVVK LCAEIGVKRQ VLKVWMHNNK NSMKKPNETE  300
KQTFEMGNAK PVAVEGGIEA EM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.11e-70ZF-HD family protein