PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023884002.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 190aa    MW: 21618.7 Da    PI: 9.703
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023884002.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18756255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ + g
  XP_023884002.1  7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAARLMCG 56
                    69******9.**********8.....334**********************87765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGARAR  60
TNFPYNPNAP QSSSSKLLSA TLTAKLHRCY MASLQMTKPS LQEPQKAPLL RANTTSGITG  120
KNINEMGTQF PDKTLMPDQE TEANWVVKKV QVESTQQFKP LEDDHIEQMI QELVHYGSIE  180
LRSVVPPQAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.13e-57ERF family protein