PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023884316.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 191aa    MW: 22125.6 Da    PI: 9.4041
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023884316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.61.4e-182668145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +++WT+eEd +l++++kq G++ W+ Iar+++ gRt++ +k++w+
   XP_023884316.1 26 KDNWTEEEDRILIEVHKQIGNK-WAEIARRLP-GRTENTIKNHWN 68
                     689*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MRQNYVVDVC NITFRVVHVY EFDIHKDNWT EEEDRILIEV HKQIGNKWAE IARRLPGRTE  60
NTIKNHWNAT KRRQNSKKNS RDSNSSATLL QSYIKALTSP NMHVDDNSII NNNNSLSESS  120
AYMVNMVTNN PQVQLENSDL TSPNWAAFLT NVYNHNEVAN IVGQGNGVLR DNCRSRKRLS  180
YVNSWWASFA R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.11e-26MYB family protein