PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023884353.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

DBB

Protein Properties

Length: 210aa MW: 23101.1 Da PI: 6.6042

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023884353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.5	5.6e-08	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++++fC ++ lC+ C ++ H XP_023884353.1 4 LCDVCESAPAIIFCAADEAALCQACDEKVH 33 7**************************998 PP
2	zf-B_box	28.6	3e-09	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + ++C+ +e+ ++ ++Ce +++ lC +C ++ H g H XP_023884353.1 52 NVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGgkrtH 91 789*****************************96544455 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MRTLCDVCES APAIIFCAAD EAALCQACDE KVHLCNKLAS RHVRVGLADP SNVPRCDICE 60 NAPAFFYCEI DGSSLCLQCD MTVHVGGKRT HARYLLLRQR IEFPGDKLGR SEELGTQPLD 120 PNQARRELSQ PPKLTMRENQ KNHRPSPVPV LNNNIGGDDK IENQMIDLNT RPQRVHGQAS 180 TNQEQGTDVL SGTNHESASL VPGGIFQKTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	1e-83	DBB family protein