PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023884559.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 253aa    MW: 28928.1 Da    PI: 4.9169
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023884559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM142.23e-4451382127
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                     ppGfrF Pt+eelv++yL++k+eg++      ++++i+ vdiy+++Pw+Lp+     ++++ ++w+fF++r++++a+g r++r t++gyWkatg+
  XP_023884559.1   5 PPGFRFYPTEEELVSFYLHNKLEGTRedlnRVMDRIIPVVDIYDSKPWELPQfsgdLCHGDPEQWFFFIPRQESEARGGRPRRLTQTGYWKATGS 99 
                     9************************9666433445799*************656764455777******************************** PP

             NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                      + v+s++++ +glk+t+vfy+grap+g+kt+W m+ey+
  XP_023884559.1 100 PNYVYSSNNRIIGLKRTMVFYNGRAPNGTKTEWKMNEYK 138
                     **************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEDFPPGFRF YPTEEELVSF YLHNKLEGTR EDLNRVMDRI IPVVDIYDSK PWELPQFSGD  60
LCHGDPEQWF FFIPRQESEA RGGRPRRLTQ TGYWKATGSP NYVYSSNNRI IGLKRTMVFY  120
NGRAPNGTKT EWKMNEYKAI EGEVSASTNA TPTLRQEFSL CRVYKKSKCL RAFDRRPPAV  180
IVSEPAAQQV PQSDEATPSR LNPSLTERIS SPDSSSSGDQ GQLSQPGEST GNMAVDNETF  240
WDFEQLNWFQ GLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-78NAC family protein