PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023884728.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 307aa    MW: 35083.7 Da    PI: 7.1384
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023884728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1484.1e-1591175290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +Y +YAk++GF v+k++sk   ++g+ +  t  C ++gk++++ ++   + ++r++++ gCkak++ +   dgk+ +t+++l+H H+l+
  XP_023884728.1  91 YYTQYAKQAGFGVSKRTSKLG-HDGNLKYFTISCVNQGKAKSKATN---ALKPRPKKNLGCKAKINATCCLDGKFTLTTVVLDHVHTLS 175
                     8*************9998776.8999***************99877...999**********************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MAENGVAIPS DENDAPTLVS DASNSSTFDN EDYMSSDEEI VIDEEENEQK LEIEKIEEKK  60
HEINKILDEN EIVLEPKVGM MFNSEEEVRA YYTQYAKQAG FGVSKRTSKL GHDGNLKYFT  120
ISCVNQGKAK SKATNALKPR PKKNLGCKAK INATCCLDGK FTLTTVVLDH VHTLSLGKAR  180
YFRCHKQLDS YMKRRLELND KVGIHISKNY KSIVIEAGGF EKLPFGEKDC RNHVDKARQL  240
RLGVGGARAL RDYFVRMQEK DDRFYYVMDV NDRSRLRNVF WADARSRAIC EYFGDVITFD  300
TPYLTNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.28e-27FAR1 family protein