PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023884758.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 246aa MW: 28145 Da PI: 9.8593

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023884758.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	130.6	1.1e-40	15	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lp G+rFhPtdeelvv+yLk+kv + ++++ +vi+e+d+++++Pw Lp + +++ yfFs+r++ ++++++ra+ sgyWk gkdk++l++ XP_023884758.1 15 LPIGYRFHPTDEELVVHYLKRKVFSIPFPA-SVIPEFDVFQTDPWGLPGDL---NEKRYFFSSRKSV--NENKSKRAAGSGYWKPIGKDKQILAS 103 699*************************.99***********544...467898776..567999**************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg++k L+f +g+++ g+kt+Wvmheyrl XP_023884758.1 104 gSNQAVGMRKALIFCEGKRSYGTKTRWVMHEYRL 137 66778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MDQRPNFVIQ GGFKLPIGYR FHPTDEELVV HYLKRKVFSI PFPASVIPEF DVFQTDPWGL 60 PGDLNEKRYF FSSRKSVNEN KSKRAAGSGY WKPIGKDKQI LASGSNQAVG MRKALIFCEG 120 KRSYGTKTRW VMHEYRLVDS QTNTYSTQVS EIEKEDWVIY CVLKRKKRNE KRGAISQPSK 180 RKKVQSLEVI RPSFMNSKVE ESSDLGPPQP SASCSSVITD IRPNELDQEE TSSHISFSSF 240 SCMREA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	183	KRKKRNEKRGAISQPSKRKK
2	165	184	KRKKRNEKRGAISQPSKRKK
3	166	185	KRKKRNEKRGAISQPSKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-54	NAC family protein