PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023885113.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB
Protein Properties Length: 113aa    MW: 12864.6 Da    PI: 5.9929
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023885113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.82.2e-124586648
                     HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     teEd+l+ ++v++ G++ W  I++ +  gR +kqc++rw+++l
   XP_023885113.1 45 TEEDDLICELVAKQGKKKWCEISKSLL-GRIGKQCRERWHNHL 86
                     8*************************9.*************97 PP
2Myb_DNA-binding21.55.5e-0793113222
                      SSS-HHHHHHHHHHHHHTTTT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg 22 
                       +WT+eE+ +l++a++++G++
   XP_023885113.1  93 TAWTKEEESILINAHQMYGNK 113
                      68*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MMSSNPGLVT YGSSDEFFES SVAEVEAHNW ILEPSASVLC HECATEEDDL ICELVAKQGK  60
KKWCEISKSL LGRIGKQCRE RWHNHLNPNI KKTAWTKEEE SILINAHQMY GNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02320.26e-31MYB family protein