PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023885172.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 247aa MW: 28190.9 Da PI: 6.7191

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023885172.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	96.3	3.5e-30	59	146	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA+ +GF +r+++ ++s r+g++++r++vC+keg+r+ + k+ +++r++ra tr gCka+++vkkek+gkw+vt++++eHnH+l+ XP_023885172.1 59 FYDAYATCMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPKR-SENRKPRAITREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLV 146 9*****************************************99.9*************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MEFGKSGNEC LPLSHHSSGE DGDIIESSTG KDLVSTEGSS DVEPYVGMDF ESEEAAKVFY 60 DAYATCMGFI MRVDAFRRSM RDGKVVWRRL VCNKEGFRKL RPKRSENRKP RAITREGCKA 120 MIVVKKEKTG KWVVTRFVKE HNHPLVVTPA NGSHFALTDE ELALDPVVDA CSLDEKIREL 180 TAELQRERKR SAAFQEQLDM VLRDMEDHSH HLSRNIDDIV QSVREIESKR FNRQDLNLSN 240 LLGMQTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	1e-88	FAR1 family protein