PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023885205.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 255aa MW: 30061.9 Da PI: 5.4743

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023885205.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82	1e-25	78	168	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr.traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +Y++++GF+vr++++++s++n+ ++ ++fvCskeg+re++ ++++ + + tr gC a+l++ +++ +kw+vtk+ +eHnH+l XP_023885205.1 78 EFYIAYGRRIGFTVRIHHNRRSRMNNMVIGQDFVCSKEGFREKKYVYRKDRVLpSPPLTREGCPAMLRLALRDGEKWVVTKFIQEHNHTLL 168 6****************************************998833333347899****************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MESPSNQAFD SDESEKCLQI ESFVEHEFAD YDLSKDVDAC IGEIDKIVEQ PNESFPLIGN 60 VLEPYIGMEF KSRDDAREFY IAYGRRIGFT VRIHHNRRSR MNNMVIGQDF VCSKEGFREK 120 KYVYRKDRVL PSPPLTREGC PAMLRLALRD GEKWVVTKFI QEHNHTLLSP SKVPWRGSGK 180 SMISEDEKDQ RIRELTLELS NERQRCKRRC AAYQEQLHMV LKYIEEHTDH MSRRVQDIVQ 240 NVRELEEEEQ QDSDL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	208	RQRCKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	2e-40	FAR1 family protein