PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023885432.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 372aa MW: 42573.4 Da PI: 6.3813

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023885432.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.0005	79	101	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_023885432.1 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP
2	zf-C2H2	16.5	2.4e-05	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H XP_023885432.1 106 YVCHyeGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP
3	zf-C2H2	20.7	1.1e-06	136	160	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp Cgk Fs nL++H++tH XP_023885432.1 136 FICPheGCGKAFSLDFNLRSHMKTH 160 78**********************9 PP
4	zf-C2H2	17.8	9.4e-06	166	190	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H XP_023885432.1 166 HICPypDCGKRYAHEYKLKNHIASH 190 679999*****************96 PP
5	zf-C2H2	13.8	0.00017	229	254	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+r+ H XP_023885432.1 229 YACPyeGCEKAYIHEYKLKLHLRReH 254 89**********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MEMQFTHTLF ERRPIVKSKT PAVKWFKEWV PQDVVATGGK CFVMKWVTEE SLKALKEKAK 60 EPEPPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS 120 SKLKRHFLIH TGERDFICPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRYAHE 180 YKLKNHIASH HEKNVPVDVA KYTPPSEKQN KTPKPSSGVY ASASSDRPYA CPYEGCEKAY 240 IHEYKLKLHL RREHPGHTSD ENAENAAANA DNEMDEASDQ DAYGGKRVNG KSQKQSRPKP 300 NLKLPPAKVT QRKGSTPSPA PVNVMKKAWP AKEEAYEEED SEETEEDRDN VEDGWRYAEN 360 NEDDDEETEY ED

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MEMQFTHTLF ERRPIVKSKT PAVKWFKEWV PQDVVATGGK CFVMKWVTEE SLKALKEKAK  60
EPEPPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS  120
SKLKRHFLIH TGERDFICPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRYAHE  180
YKLKNHIASH HEKNVPVDVA KYTPPSEKQN KTPKPSSGVY ASASSDRPYA CPYEGCEKAY  240
IHEYKLKLHL RREHPGHTSD ENAENAAANA DNEMDEASDQ DAYGGKRVNG KSQKQSRPKP  300
NLKLPPAKVT QRKGSTPSPA PVNVMKKAWP AKEEAYEEED SEETEEDRDN VEDGWRYAEN  360
NEDDDEETEY ED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-143	C2H2 family protein