PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023885485.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 326aa    MW: 37116.1 Da    PI: 4.4074
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023885485.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.86.9e-12163206654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  XP_023885485.1 163 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 206
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MDMELNENVF LEELLALRRD TFETVPTEMN ELFNSGWSFD YFDQNPSAIV FPNSCYEQNL  60
DSTSYTFNEV YCPYGNEFSA PQLTDSSLTT LDTPPFPVQE DYPLSMMEEE LGILGDEIHN  120
LEVQASCKVE PIQSPEVPVF NMDACLQGKN RAKKIQGQPS KNLMAERRRR KRLNDRLSML  180
RSIVPKISKM DRTSILGDTI DYMKELLDKI NHLQQEIEVN SNAMDIFKDV KPNEVVVRNS  240
PKFDVERRNV DTRVEICCAG KPGLLLSTVN TLEALGLEIQ QCVISCFNDF AMQASCSEKL  300
EQRTLLGSED IKQALFRNAG YGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166173ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.16e-86bHLH family protein