PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023885603.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 902aa MW: 103828 Da PI: 6.6255

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023885603.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.4	8.6e-27	88	174	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfYn+YA+ vGFsvrk+ ++sk +g++++r+f+Cskeg+r+++k++ ++ +++r+etrtgC a++ ++++ dgk++vt++e +HnH+ XP_023885603.1 88 KFYNRYARLVGFSVRKDWVNRSKVHGQVVSRKFTCSKEGYRRKDKRD-VNVKKHRKETRTGCLAHMIITRQPDGKYRVTHFEAQHNHD 174 6*****************************************999.999**********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 902 aa Download sequence
MEICDHFASF YWSMEGDDGS SSSPPEENMD MRLQASNNLD LNVEQDCRSP KVVHSNGTHS 60 NLSINDEASK DAVLKIGTEF ESDEHAYKFY NRYARLVGFS VRKDWVNRSK VHGQVVSRKF 120 TCSKEGYRRK DKRDVNVKKH RKETRTGCLA HMIITRQPDG KYRVTHFEAQ HNHDNVSPTN 180 AQTLPLQREL SCSRDAEASS EDNSGSHSKS AFELMNRRFE IQESLDDLAI DYDVYLQSER 240 VRDMKEGEAG RLLHYFQRKH FENPSFFYAI QLDIDDKVSN MFWANDNMVV DYDHFSDVVC 300 LDTTSRTNKH FRPYVQFIGV NHHKQVLIFA AALLYDDTVE SFKWLFRTFI EAMSGKKPKA 360 ILTDQDAAIV EAINSVLPET SHRICVWQTY QNALKHLSHV VKETDSFAKD LKGCIFYHKD 420 EEDFIRAWEA MLEKYGLQQN EWLRWMFRER EKWAVVYGRN TFFIDMNGLH LGECLFNDLK 480 NYLNSDLDIL HFFKYFERVV EEQCYKETEA NNDMNRCLPR LMGNVVLLKH ASDVYTPRAF 540 EVFQRGYEKC LNVVVNKCNQ NGSLLEYKAK TFGQARENTV KFDSSDNTVT CSCLKFEYVG 600 FLCSHALKVL DHRNIKIVPS QYILKRWTKD GRSGTVRDCY EFTIQDNPKL VVASRYKNLC 660 HKMLKLSARA SESKEAFQFA ASQLDEVMEG VKKILTLKPE EAQAGTSSST GANVSESERA 720 DIFLDGNTID DQDENGVKGA KEKERAIPSR GQLSNVNGKV SHTKGVQNIE ASPPNIVNCI 780 SSSPRAFISS QATTPNPIMQ GMYNFDTSQV VQCMYPQSNL VMDQQPNPNI YHSPNFFSHQ 840 HDSPVQTQLL QEPLIHNPYE ESDSSTSQLR HAMELDVQHP HSPSFLLYDD RYRASNTYLG 900 PK

Sequence ? help Back to Top

Protein Sequence Length: 902 aa Download sequence

MEICDHFASF YWSMEGDDGS SSSPPEENMD MRLQASNNLD LNVEQDCRSP KVVHSNGTHS  60
NLSINDEASK DAVLKIGTEF ESDEHAYKFY NRYARLVGFS VRKDWVNRSK VHGQVVSRKF  120
TCSKEGYRRK DKRDVNVKKH RKETRTGCLA HMIITRQPDG KYRVTHFEAQ HNHDNVSPTN  180
AQTLPLQREL SCSRDAEASS EDNSGSHSKS AFELMNRRFE IQESLDDLAI DYDVYLQSER  240
VRDMKEGEAG RLLHYFQRKH FENPSFFYAI QLDIDDKVSN MFWANDNMVV DYDHFSDVVC  300
LDTTSRTNKH FRPYVQFIGV NHHKQVLIFA AALLYDDTVE SFKWLFRTFI EAMSGKKPKA  360
ILTDQDAAIV EAINSVLPET SHRICVWQTY QNALKHLSHV VKETDSFAKD LKGCIFYHKD  420
EEDFIRAWEA MLEKYGLQQN EWLRWMFRER EKWAVVYGRN TFFIDMNGLH LGECLFNDLK  480
NYLNSDLDIL HFFKYFERVV EEQCYKETEA NNDMNRCLPR LMGNVVLLKH ASDVYTPRAF  540
EVFQRGYEKC LNVVVNKCNQ NGSLLEYKAK TFGQARENTV KFDSSDNTVT CSCLKFEYVG  600
FLCSHALKVL DHRNIKIVPS QYILKRWTKD GRSGTVRDCY EFTIQDNPKL VVASRYKNLC  660
HKMLKLSARA SESKEAFQFA ASQLDEVMEG VKKILTLKPE EAQAGTSSST GANVSESERA  720
DIFLDGNTID DQDENGVKGA KEKERAIPSR GQLSNVNGKV SHTKGVQNIE ASPPNIVNCI  780
SSSPRAFISS QATTPNPIMQ GMYNFDTSQV VQCMYPQSNL VMDQQPNPNI YHSPNFFSHQ  840
HDSPVQTQLL QEPLIHNPYE ESDSSTSQLR HAMELDVQHP HSPSFLLYDD RYRASNTYLG  900
PK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-115	FAR1 family protein