PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023885604.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 889aa MW: 102211 Da PI: 6.7038

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023885604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.5	8.4e-27	75	161	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfYn+YA+ vGFsvrk+ ++sk +g++++r+f+Cskeg+r+++k++ ++ +++r+etrtgC a++ ++++ dgk++vt++e +HnH+ XP_023885604.1 75 KFYNRYARLVGFSVRKDWVNRSKVHGQVVSRKFTCSKEGYRRKDKRD-VNVKKHRKETRTGCLAHMIITRQPDGKYRVTHFEAQHNHD 161 6*****************************************999.999**********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 889 aa Download sequence
MEGDDGSSSS PPEENMDMRL QASNNLDLNV EQDCRSPKVV HSNGTHSNLS INDEASKDAV 60 LKIGTEFESD EHAYKFYNRY ARLVGFSVRK DWVNRSKVHG QVVSRKFTCS KEGYRRKDKR 120 DVNVKKHRKE TRTGCLAHMI ITRQPDGKYR VTHFEAQHNH DNVSPTNAQT LPLQRELSCS 180 RDAEASSEDN SGSHSKSAFE LMNRRFEIQE SLDDLAIDYD VYLQSERVRD MKEGEAGRLL 240 HYFQRKHFEN PSFFYAIQLD IDDKVSNMFW ANDNMVVDYD HFSDVVCLDT TSRTNKHFRP 300 YVQFIGVNHH KQVLIFAAAL LYDDTVESFK WLFRTFIEAM SGKKPKAILT DQDAAIVEAI 360 NSVLPETSHR ICVWQTYQNA LKHLSHVVKE TDSFAKDLKG CIFYHKDEED FIRAWEAMLE 420 KYGLQQNEWL RWMFREREKW AVVYGRNTFF IDMNGLHLGE CLFNDLKNYL NSDLDILHFF 480 KYFERVVEEQ CYKETEANND MNRCLPRLMG NVVLLKHASD VYTPRAFEVF QRGYEKCLNV 540 VVNKCNQNGS LLEYKAKTFG QARENTVKFD SSDNTVTCSC LKFEYVGFLC SHALKVLDHR 600 NIKIVPSQYI LKRWTKDGRS GTVRDCYEFT IQDNPKLVVA SRYKNLCHKM LKLSARASES 660 KEAFQFAASQ LDEVMEGVKK ILTLKPEEAQ AGTSSSTGAN VSESERADIF LDGNTIDDQD 720 ENGVKGAKEK ERAIPSRGQL SNVNGKVSHT KGVQNIEASP PNIVNCISSS PRAFISSQAT 780 TPNPIMQGMY NFDTSQVVQC MYPQSNLVMD QQPNPNIYHS PNFFSHQHDS PVQTQLLQEP 840 LIHNPYEESD SSTSQLRHAM ELDVQHPHSP SFLLYDDRYR ASNTYLGPK

Sequence ? help Back to Top

Protein Sequence Length: 889 aa Download sequence

MEGDDGSSSS PPEENMDMRL QASNNLDLNV EQDCRSPKVV HSNGTHSNLS INDEASKDAV  60
LKIGTEFESD EHAYKFYNRY ARLVGFSVRK DWVNRSKVHG QVVSRKFTCS KEGYRRKDKR  120
DVNVKKHRKE TRTGCLAHMI ITRQPDGKYR VTHFEAQHNH DNVSPTNAQT LPLQRELSCS  180
RDAEASSEDN SGSHSKSAFE LMNRRFEIQE SLDDLAIDYD VYLQSERVRD MKEGEAGRLL  240
HYFQRKHFEN PSFFYAIQLD IDDKVSNMFW ANDNMVVDYD HFSDVVCLDT TSRTNKHFRP  300
YVQFIGVNHH KQVLIFAAAL LYDDTVESFK WLFRTFIEAM SGKKPKAILT DQDAAIVEAI  360
NSVLPETSHR ICVWQTYQNA LKHLSHVVKE TDSFAKDLKG CIFYHKDEED FIRAWEAMLE  420
KYGLQQNEWL RWMFREREKW AVVYGRNTFF IDMNGLHLGE CLFNDLKNYL NSDLDILHFF  480
KYFERVVEEQ CYKETEANND MNRCLPRLMG NVVLLKHASD VYTPRAFEVF QRGYEKCLNV  540
VVNKCNQNGS LLEYKAKTFG QARENTVKFD SSDNTVTCSC LKFEYVGFLC SHALKVLDHR  600
NIKIVPSQYI LKRWTKDGRS GTVRDCYEFT IQDNPKLVVA SRYKNLCHKM LKLSARASES  660
KEAFQFAASQ LDEVMEGVKK ILTLKPEEAQ AGTSSSTGAN VSESERADIF LDGNTIDDQD  720
ENGVKGAKEK ERAIPSRGQL SNVNGKVSHT KGVQNIEASP PNIVNCISSS PRAFISSQAT  780
TPNPIMQGMY NFDTSQVVQC MYPQSNLVMD QQPNPNIYHS PNFFSHQHDS PVQTQLLQEP  840
LIHNPYEESD SSTSQLRHAM ELDVQHPHSP SFLLYDDRYR ASNTYLGPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-116	FAR1 family protein