PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023885639.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HSF
Protein Properties Length: 315aa    MW: 35313.2 Da    PI: 5.3054
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023885639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.43.1e-35241152102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+++++ed++++++isw+++g++f+v++++ fak++Lpk+Fkh+nf+SFvRQLn+YgF+kv  ++         weF++++F++g+k+ll++
  XP_023885639.1  24 FLTKTFQLVEDRTINDVISWNDDGSTFIVWNPTVFAKDLLPKFFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNDYFRRGEKKLLCE 109
                     9*****************************************************************99.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_023885639.1 110 IQRRKI 115
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MAPAMEQNGE SATSESQRSI PTPFLTKTFQ LVEDRTINDV ISWNDDGSTF IVWNPTVFAK  60
DLLPKFFKHN NFSSFVRQLN TYGFRKVVPD RWEFSNDYFR RGEKKLLCEI QRRKISTPVV  120
SPVAVASSAV PIVKTMISPS NSGEEQVVSA NSSPTRTTAP ADLIDENERL RKENVQLSKE  180
LAEIKSLCNN IFALMSNFAN NNNNNSNNNN NDNKSALAGK PPLDLLPAKR YADEEETETE  240
TESSAKLFGV PIGGGGGAIA KRARESDDDD TELRLQQPDP TKPEPLDCES NGDRKATWLI  300
KHCHWDSNRN QRVYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.11e-83HSF family protein