PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023885805.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 221aa    MW: 24217 Da    PI: 5.161
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023885805.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-1861111155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+WvAeIr+p   + r kr +lg+f+ a eAa a+++a++ ++g
  XP_023885805.1  61 CNYRGVRQRT-WGKWVAEIREP---N-RgKRLWLGSFDNAVEAASAYDEAARVMYG 111
                     56*****999.**********8...3.35**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MESSKKRKSR GDGVSVAETL AKWRDHNAQL ESSAKRARKL PAMGSKKGCM KGKGGPENAL  60
CNYRGVRQRT WGKWVAEIRE PNRGKRLWLG SFDNAVEAAS AYDEAARVMY GAYARLNFPE  120
SVSTISGPTP VESEVSAVES TAMANTSEST AMPTASTLVQ DESGVTSYYM DSGLDQFLDC  180
SENELFNVQE LMALLDSDPH GFTDSELGFG YYGDQFGMPY K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.29e-40ERF family protein