PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023886000.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 505aa MW: 55815.4 Da PI: 5.0002

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023886000.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.1	1.6e-34	21	112	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Flkkly +++d+e+++++sws+ +nsfvv++ +efa ++Lpk+Fkh+nf+SF+RQLn+YgFkkv+ ++ eF+++ F +g+++ll++ XP_023886000.1 21 FLKKLYAMVDDPETDSVVSWSNANNSFVVWNAHEFAASLLPKHFKHKNFSSFIRQLNTYGFKKVDPDR---------YEFANERFLRGQTHLLKS 106 9**************************************************************999.........78************ PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k XP_023886000.1 107 ISRRKP 112 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MEGPANDEGS MASSSNTLPP FLKKLYAMVD DPETDSVVSW SNANNSFVVW NAHEFAASLL 60 PKHFKHKNFS SFIRQLNTYG FKKVDPDRYE FANERFLRGQ THLLKSISRR KPVHVPGHQE 120 QPKVQSSSVG ACVEVGKFGL EEEVERLKRD KNVLMQELVR LRQQQQTTDN QLHDVGQRVQ 180 VMEQQQQRMM SFLAKALKSP GILAQIVQQQ NESSRNTAAV SKKRRLSGQE EESAVGQHHT 240 NAPDGQLVKY QPSINEAAKA LLRQILKMNA TPRVEPLMNN SDAFLIDDAP THTFDSGCSS 300 SRVSGVTLSE VPPMSGQSYM PAKAGFPVSC PSTSIPDIQS SSYVVPDHAK AAQFSKLNVH 360 NSQEETVLPD FTEMRGILPE STAEIGDMNL VGAVTGNESH LDPISAALDG TTPIETDAFS 420 PESDVEAFLD EIPKLPGIND IFWEQFLAES ALSGDTDEIN SSSLDGSVAM DHELQIENKN 480 GWDRIQHMDH LTEQMGLLAS ESRMG

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MEGPANDEGS MASSSNTLPP FLKKLYAMVD DPETDSVVSW SNANNSFVVW NAHEFAASLL  60
PKHFKHKNFS SFIRQLNTYG FKKVDPDRYE FANERFLRGQ THLLKSISRR KPVHVPGHQE  120
QPKVQSSSVG ACVEVGKFGL EEEVERLKRD KNVLMQELVR LRQQQQTTDN QLHDVGQRVQ  180
VMEQQQQRMM SFLAKALKSP GILAQIVQQQ NESSRNTAAV SKKRRLSGQE EESAVGQHHT  240
NAPDGQLVKY QPSINEAAKA LLRQILKMNA TPRVEPLMNN SDAFLIDDAP THTFDSGCSS  300
SRVSGVTLSE VPPMSGQSYM PAKAGFPVSC PSTSIPDIQS SSYVVPDHAK AAQFSKLNVH  360
NSQEETVLPD FTEMRGILPE STAEIGDMNL VGAVTGNESH LDPISAALDG TTPIETDAFS  420
PESDVEAFLD EIPKLPGIND IFWEQFLAES ALSGDTDEIN SSSLDGSVAM DHELQIENKN  480
GWDRIQHMDH LTEQMGLLAS ESRMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-144	HSF family protein