PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023886088.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 193aa    MW: 22641.6 Da    PI: 8.9202
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023886088.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.6e-054270123
                    EEET.....TTTEEESSHHHHHHHHHH.T CS
         zf-C2H2  1 ykCp.....dCgksFsrksnLkrHirt.H 23
                    ++C       Cgk F++   L +H+   H
  XP_023886088.1 42 FRCDwdqqySCGKKFTTAGGLSVHMTQvH 70
                    6788888889***************8766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MSKKRKDIPD LQEALDKRWC YYCERIFQDD KVLCDHQRYK HFRCDWDQQY SCGKKFTTAG  60
GLSVHMTQVH KTKLEKIQNT IEGRENPAVE IFGMLGIPQE LLDAHRREIE TQYYQAEAEH  120
RARTGNPLRG PNPNAGKKQV EELTHEEKMA KLEAHRAKNR ANKAAREAGF KDAEDQARQL  180
VSVIYTIVHE RRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30970.15e-28C2H2 family protein