PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023886222.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 395aa MW: 45709.2 Da PI: 8.6201

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023886222.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.7	7.3e-22	49	145	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk........tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 fY+e+Ak+ GF +r+++skk r++ +t+r +vC eg+r++++ ++k+rr+ + rtgC+a+l+v k+k +kw+v+ ++++HnH XP_023886222.1 49 FYKEFAKKEGFGIRIRTSKKAPRSDDVTSRIYVCCSEGQRKTKNALdsglsrddENKARRSCLSLRTGCEAMLRVMKNKkLQKWVVKGFDNNHNH 143 **************************************998877999999999999*********999989************ PP FAR1 88 el 89 + XP_023886222.1 144 GI 145 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MECEELYDIP NNSRPSEQEL PLEDFGDCEL KSKPYVEMQF DSLDDVETFY KEFAKKEGFG 60 IRIRTSKKAP RSDDVTSRIY VCCSEGQRKT KNALDSGLSR DDENKARRSC LSLRTGCEAM 120 LRVMKNKKLQ KWVVKGFDNN HNHGIISPKS VSYLRCHKKM STVAKSLVEN FGEEGLPTGK 180 VAMMFNVGDQ TFTSRDCWNH LRDVRGKNLD AGDASAVLNY CQKQQAQNSN FFYAIQCDDV 240 GHMVNFFWVD ARSRMAYQYF GDVVTFDTTY KTNKYDLPFA PFTGLNHHCQ SILFGCALLQ 300 DETEQTFVWL FETWLQAMWG KEPKSIITDQ DLAMGAAIAK VFPRTRHRLC LWHIKKKFPE 360 KLSHIYHKKS IFKHELKRCI RESPSVENLR RLGRA

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MECEELYDIP NNSRPSEQEL PLEDFGDCEL KSKPYVEMQF DSLDDVETFY KEFAKKEGFG  60
IRIRTSKKAP RSDDVTSRIY VCCSEGQRKT KNALDSGLSR DDENKARRSC LSLRTGCEAM  120
LRVMKNKKLQ KWVVKGFDNN HNHGIISPKS VSYLRCHKKM STVAKSLVEN FGEEGLPTGK  180
VAMMFNVGDQ TFTSRDCWNH LRDVRGKNLD AGDASAVLNY CQKQQAQNSN FFYAIQCDDV  240
GHMVNFFWVD ARSRMAYQYF GDVVTFDTTY KTNKYDLPFA PFTGLNHHCQ SILFGCALLQ  300
DETEQTFVWL FETWLQAMWG KEPKSIITDQ DLAMGAAIAK VFPRTRHRLC LWHIKKKFPE  360
KLSHIYHKKS IFKHELKRCI RESPSVENLR RLGRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-89	FAR1 family protein