PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023886249.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 193aa    MW: 21537.1 Da    PI: 10.6233
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023886249.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA24.15.1e-08167191124
            GATA   1 Cs..nCgttkTplWRrgpdgnktLCn 24 
                     C+  nCg+  Tp+WR+gp g+k +C+
  XP_023886249.1 167 CTnyNCGVYITPMWRKGPLGPK-VCS 191
                     55559*****************.**5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MAPQSFNQAY AVNRNGYSNP SRNQQLDLTL RLGSFQFANP IPVNPQPQYA QPNSFTGPHT  60
QAQYHNGMVY GGSNTRGQAS NTPRVPYSTQ VRIMGNHFMN NSNGQSQIAA AVGGVHHHIY  120
NFIPPMQQMN EYTLLNPSSR RGNGSSSSRK KSSRKREVNY NDPNKRCTNY NCGVYITPMW  180
RKGPLGPKVC SLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.13e-07GATA family protein