PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023886578.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family Nin-like
Protein Properties Length: 283aa    MW: 33061.3 Da    PI: 4.4449
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023886578.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.93.1e-26138188252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     +k +s e++s+yF++pi +AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl
  XP_023886578.1 138 SKMLSKEHISQYFYMPIIQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSL 188
                     57899*******************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MGSQTLNGWW SKQELVYDIE EPLHFSNQMP SVDLSGYSSL DWQYELPMQE CFFDVVPLMA  60
SFPTDPLYAS LDLEPTTTIQ DDFFFSCGNR PEVWNEIVAG FEPQNQALIL SSNNEKKDNE  120
VNEERRKKRC REERCSSSKM LSKEHISQYF YMPIIQAAKE LNVGLTLLKK RCRELGIRRW  180
PHRKLMSLQT LIKNVQELAK EEGEESEAKL SEAIEILEGE RKLLEEIPDA QLEDNTKRLR  240
QACFKANYKK RKLMGMVDSH DKEEEEDQDD EEEEDSLVGP LFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.13e-46Nin-like family protein