PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023886707.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 297aa    MW: 31367.4 Da    PI: 5.7595
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023886707.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.6e-10146190554
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  XP_023886707.1 146 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 190
                     99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MANNPSEATN DDFLEQILGL PSFASAEAGL TGADGGLGGS GTGPPPMMLQ LSSGDLGGGG  60
GGSAGFHGQV FPLGLSLEQG KGGFLKPEEA SGSGKRFRDD VVDGRASSMK NVFHGQPMTN  120
TVAAAPHPPA MRPRVRARRG QATDPHSIAE RLRRERIAER IRALQELVPS VNKTDRAAML  180
DEIVDYVKFL RLQVKVLSMS RLGGAGAVAP LVTDIPLSSV EEEGSEGGRN QPAWEKWSND  240
GTERQVAKLM EDNVGAAMQF LQSKALCIMP ISLASVIYQT QPPDTSSIVK PENNPPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151156RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.21e-105bHLH family protein