PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023886728.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 249aa    MW: 27634.5 Da    PI: 8.1162
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023886728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.62.3e-20129163135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  XP_023886728.1 129 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 163
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MHRCSSSHHQ GNMVGPCTCG MFHSQGNSFS MLFSMQNHSP YDESEMYSFA PSSSSVDCTL  60
SLGTPSTRLT EDDEKRRVRS GSSMSNFCWD ILQTKQTPSA PQTHKAIRGG NNGSYNNNSS  120
NDPLLARRCA NCDTTSTPLW RNGPRGPKSL CNACGIRFKK EERRATAAAS TTSNNGATSG  180
SLMEPNHMVH NNSWYAHSQT QKMPCYSPAM GNEFRFIEEN EQNSDTGIPF LSWRLNVTDR  240
PGLVHDFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.11e-61GATA family protein