PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023886759.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HSF
Protein Properties Length: 293aa    MW: 32037.5 Da    PI: 6.7818
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023886759.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.41.7e-36101012102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+ ++++isw+e+g++fvv+++ +fa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF++++Fk+++kell++
  XP_023886759.1  10 FLTKTYQLVDDPITDDVISWNEDGSTFVVWKTADFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDK---------WEFANENFKRSQKELLSQ 95 
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k+
  XP_023886759.1  96 IRRRKT 101
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MAQRSVPAPF LTKTYQLVDD PITDDVISWN EDGSTFVVWK TADFARDLLP NYFKHNNFSS  60
FVRQLNTYGF RKIVPDKWEF ANENFKRSQK ELLSQIRRRK TVTSPPANTP ASGKPVGGGP  120
SSSSNSGEDL GSTSTSSPDS KNPGSVETTT PTAQVSDLSG ENEKLKKDNE MLSSELAQTK  180
KQCDELVAFL TEYLKVGPDQ INHIIRQGSC GSSCVDEIIG GGGPIIGKVD SSDDDDENNV  240
VKDNGNGNGN GGEGLKLFGV WLKGNRKRGR DEKVRFNNGS HTRPLAKEMK VCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.15e-86HSF family protein