PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023887029.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 344aa MW: 39019.8 Da PI: 6.9066

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023887029.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.5	4.2e-56	16	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv + ++++ +i evd++k+ePwdLp ++k +e+ewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ XP_023887029.1 16 LPPGFRFHPTDEELITHYLSPKVLDANFSA-VAIGEVDLNKCEPWDLPWRAKMGEREWYFFCVRDRKYPTGLRTNRATDAGYWKATGKDKEIFK- 108 79***********************999.67***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfykgrapkgek++Wvmheyrle XP_023887029.1 109 GKTLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 142 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MENVSTTAKE DEQIELPPGF RFHPTDEELI THYLSPKVLD ANFSAVAIGE VDLNKCEPWD 60 LPWRAKMGER EWYFFCVRDR KYPTGLRTNR ATDAGYWKAT GKDKEIFKGK TLVGMKKTLV 120 FYKGRAPKGE KSNWVMHEYR LEGKYSGHNL PKTARNEWVI CRVFNKISGG KKTHISGLTK 180 LSPYANESRP SLLPPLMDSS PYNSETRIDA GETSHVTCFS SPVENHKTKE HMVDNFNTSL 240 LAASPSSNPS HISSAPNSAY YTNMGNLQYS DTALMQDQLF RMLFENHAIN MKQNMKAEFS 300 SETGFSTDMS SMVSNHDMAR RSFEDQDDPS TSGGPVDIDC LWNY

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MENVSTTAKE DEQIELPPGF RFHPTDEELI THYLSPKVLD ANFSAVAIGE VDLNKCEPWD  60
LPWRAKMGER EWYFFCVRDR KYPTGLRTNR ATDAGYWKAT GKDKEIFKGK TLVGMKKTLV  120
FYKGRAPKGE KSNWVMHEYR LEGKYSGHNL PKTARNEWVI CRVFNKISGG KKTHISGLTK  180
LSPYANESRP SLLPPLMDSS PYNSETRIDA GETSHVTCFS SPVENHKTKE HMVDNFNTSL  240
LAASPSSNPS HISSAPNSAY YTNMGNLQYS DTALMQDQLF RMLFENHAIN MKQNMKAEFS  300
SETGFSTDMS SMVSNHDMAR RSFEDQDDPS TSGGPVDIDC LWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-127	NAC family protein