PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023887366.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GRAS
Protein Properties Length: 691aa    MW: 76841.5 Da    PI: 6.2838
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023887366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS423.51.8e-1293096751373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv+lL +c+ea+  ++++++++++a+l elasp+g+p+ Rl +y+teALa r++r +++++++ +p+e + +  +e+ +al+l+++vsPi+kf h
  XP_023887366.1 309 LVSLLAACVEAIGVRNTAAIHHFIAKLGELASPKGSPISRLSTYYTEALAIRVTRLWPQIFHINAPRELD-RVDDESGTALRLLNQVSPIPKFLH 402
                     6899************************************************************999998.5678888999************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +t N+ +l+a+eg++rvHiiDfdi+qGlQWp+L+q+LasR+++p ++RiTg+g+    sk+el+etg+rLa fAe+l++pfef++ v++rled++
  XP_023887366.1 403 FTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGE----SKQELNETGDRLAGFAEALNLPFEFHP-VVDRLEDVR 492
                     ******************************************************....***************************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     l++L+vk++E++aVn+++q+h++l + +  +   +++L l++s++P++v ++eqea+hn++++ +r++++l+yysa+fds+ ++lp +s+ r k+
  XP_023887366.1 493 LWMLHVKEQESVAVNCIFQMHKTLYDGTGGA--LRDFLGLIRSTNPTIVLMAEQEAEHNDPRLETRVSNSLKYYSAIFDSIGSSLPLDSSVRLKI 585
                     ************************6655444..489*********************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee...sgslvlgWkdrpLvsvSaW 373
                     E+  +grei+n+vaceg++r+erhe++ekWr+ +e+ GF+ + ++e+++ q ++ll++++ + ++v+++     +l+lgW d+pL++vSaW
  XP_023887366.1 586 EEI-FGREIRNIVACEGRDRFERHERFEKWRKLIEQGGFRCLGITEREMLQSQMLLKMYSCENFSVKKQgqdGVALTLGWLDQPLYTVSAW 675
                     **9.********************************************************999****6644244566************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 691 aa     Download sequence    
MLAGCSSSTL LSPRHRLRSE APAQFQACHF QLPSMSTQRL DLPCTFSRKD TSRSQPIRPV  60
GLSVEKPIES KTSTCSLKQN IRLPPLATSA QTTNAQTAFI EAAKREIKDE FWGEKGKSLK  120
KKRFAEQGSV DESCISRAKR KRGSSDNGKS NDILEGGGDS LSLGQLGAGS FWFQPGFEVS  180
RSFTGLINPP QVPFTLTCSG DEERVCYVPG EVIQQPLSNN PWVNSVVTEI TVTDLGEKDG  240
ETSHGPVKEA SGSSTSSESQ SLGLRLHENV SEQEVGNGSN RNPYSYEGNE VEAREEENNN  300
QVEHQGFELV SLLAACVEAI GVRNTAAIHH FIAKLGELAS PKGSPISRLS TYYTEALAIR  360
VTRLWPQIFH INAPRELDRV DDESGTALRL LNQVSPIPKF LHFTSNEILL RAFEGKDRVH  420
IIDFDIKQGL QWPSLFQSLA SRTNPPSHVR ITGIGESKQE LNETGDRLAG FAEALNLPFE  480
FHPVVDRLED VRLWMLHVKE QESVAVNCIF QMHKTLYDGT GGALRDFLGL IRSTNPTIVL  540
MAEQEAEHND PRLETRVSNS LKYYSAIFDS IGSSLPLDSS VRLKIEEIFG REIRNIVACE  600
GRDRFERHER FEKWRKLIEQ GGFRCLGITE REMLQSQMLL KMYSCENFSV KKQGQDGVAL  660
TLGWLDQPLY TVSAWAPIDV AGSSSSYSHP A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120142KKKRFAEQGSVDESCISRAKRKR
2121143KKKRFAEQGSVDESCISRAKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein