PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023887536.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 181aa    MW: 21135.8 Da    PI: 8.1332
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023887536.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM72.31.2e-22181662128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykv.ePwdLpkkvka......eekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                     p Gf F+P de lv++yL++k+++ + ++++evi+e d+y + ePw++ +k++       +++e++fF++ ++ ++++kr +r++ +g Wk  g+
  XP_023887536.1  18 PGGFVFDPLDEVLVTHYLHPKATEISdCKCHEVIPERDLYGTeEPWQIWEKMERanncirNKEEMFFFTRLKRVSSKSKRCKRSIGKGCWKGDGN 112
                     77*******************88766599999********9978****74333323345356799****************************** PP

             NAM  89 dkevlsk....kgelvglkktLvfy..........kgrapkgektdWvmheyrl 128
                     + +++      +++ +g+kkt  +            +++ + ++ +W++he +l
  XP_023887536.1 113 SSNIFYCvdqnERKRIGVKKTYHYEnsnvktdkskAKDDDNNNRYRWILHEISL 166
                     ****98767667777*******999777766654334556667999*****886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MEAVLSSSSS SSSTLEWPGG FVFDPLDEVL VTHYLHPKAT EISDCKCHEV IPERDLYGTE  60
EPWQIWEKME RANNCIRNKE EMFFFTRLKR VSSKSKRCKR SIGKGCWKGD GNSSNIFYCV  120
DQNERKRIGV KKTYHYENSN VKTDKSKAKD DDNNNRYRWI LHEISLDESL LQHAKVLTNH  180
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.14e-09NAC family protein