PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023887704.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 246aa    MW: 26972.7 Da    PI: 5.6571
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023887704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.38e-1875123355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g
  XP_023887704.1  75 YRGVRIRQ-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALTIKG 123
                     9****888.**********843...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MEESSNLECE AKTTSTSSSS SNSNTSTSSS SSPNSTNVST EYRAEKSCKR GHEAKNGDES  60
RKEPKNGDDR KHQTYRGVRI RQWGKWVSEI REPRKKSRIW LGTFPTPEMA ARAHDVAALT  120
IKGQSAFLNF PELAQVLPRP ASSSPKDIQA AAAKAAAMNF PGSHEVEPVL APHSPSSTMA  180
SHDTQDSSTS TLTDKDDAFL GLPDLLIDVN SQIDEFCYSS TWQLINGAEP VDTCLRLEEP  240
FLWGCY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.17e-49ERF family protein