PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023887816.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NF-YB

Protein Properties

Length: 251aa MW: 27498.6 Da PI: 6.3956

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023887816.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	170.7	1.7e-53	72	167	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 reqd+++Pianv+rim+++lP++akis+daket+qecvse+isf+t+ea+++cqre+rkt++++d+lwa+++lGf+dyvepl+vyl++yre+e+e XP_023887816.1 72 REQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYVEPLTVYLNRYREAENE 166 89*******************************************************************************************98 PP NF-YB 97 k 97 + XP_023887816.1 167 R 167 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MERGAEFPHF GSRHAKSGPA PRLVLPVNPN SNIPDFITNI DTNNANANLN VDANANANTS 60 NGNQRAHPCI IREQDQYMPI ANVIRIMRRI LPSHAKISDD AKETIQECVS EYISFITGEA 120 NERCQREQRK TVTAEDVLWA MGKLGFDDYV EPLTVYLNRY REAENERNNL RVDQLPYVGF 180 KRSMDYGPVG VPPGPPPYGP GFPMAHHPAM FDASAMGSGY HNGSGAGGSS SSSAGAQNSG 240 LPSFDPYAQF K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	5e-56	NF-YB family protein