PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023888010.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 467aa MW: 53918.9 Da PI: 6.6889

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023888010.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.5	9.6e-23	98	186	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYA+++GFsvr + k+ + g+i++rtf Cskeg+r+ +k++ ++++ +r+ +rtgC a+++ +++kdg +v +++ +HnHe++p XP_023888010.1 98 EFYKEYAHRTGFSVREHFVKRG-NAGQIIRRTFSCSKEGERAVDKHR-KNASYRRPISRTGCLAQMTCHLQKDGMLHVVSFHGQHNHEFVP 186 6***********99887776.8889************9998.99999*********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MDTSQIILLK DELNDCIADQ QEEAQIEPTH GSPKNSNTPS RHSKEIVEVP DIVLEDEFIG 60 WIADQQEETK VELTLGSPNK SNTPPIGMKF DCDEIAYEFY KEYAHRTGFS VREHFVKRGN 120 AGQIIRRTFS CSKEGERAVD KHRKNASYRR PISRTGCLAQ MTCHLQKDGM LHVVSFHGQH 180 NHEFVPSPMK HMLRLKRKIS STQKAIANDA ERSGISIKQT IELLSMQAGC RENLGFMDVD 240 YKNHVHNERG MALRKGDGPT MMEYFHKMQS ANPSYFYSIQ VDDDGQIMNI FWVDAKSIVD 300 YGHFGDVVCF GTTYRTNRYD RPFAPFVGVN HHKQSIIFGA ALLYDETIES FKWLFETFLP 360 AMSRKQPRTI LTDQSAAMAK AITEVFPKSN HRLCVWHIYQ NAAKNLHHVF HSSKHFANDF 420 SDCLYEYEDE DEWLVSWDYM LKEYGLTDNK WLCSIFDVKE KSSMVYG

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MDTSQIILLK DELNDCIADQ QEEAQIEPTH GSPKNSNTPS RHSKEIVEVP DIVLEDEFIG  60
WIADQQEETK VELTLGSPNK SNTPPIGMKF DCDEIAYEFY KEYAHRTGFS VREHFVKRGN  120
AGQIIRRTFS CSKEGERAVD KHRKNASYRR PISRTGCLAQ MTCHLQKDGM LHVVSFHGQH  180
NHEFVPSPMK HMLRLKRKIS STQKAIANDA ERSGISIKQT IELLSMQAGC RENLGFMDVD  240
YKNHVHNERG MALRKGDGPT MMEYFHKMQS ANPSYFYSIQ VDDDGQIMNI FWVDAKSIVD  300
YGHFGDVVCF GTTYRTNRYD RPFAPFVGVN HHKQSIIFGA ALLYDETIES FKWLFETFLP  360
AMSRKQPRTI LTDQSAAMAK AITEVFPKSN HRLCVWHIYQ NAAKNLHHVF HSSKHFANDF  420
SDCLYEYEDE DEWLVSWDYM LKEYGLTDNK WLCSIFDVKE KSSMVYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-92	FAR1 family protein