PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023888037.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 163aa    MW: 18970.4 Da    PI: 5.9421
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023888037.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.36.6e-1930114999
                     HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                      +l+ grl++pk f++++ ++   s    l+ ++  +W+v+l  +k+ ++++l+kGWkeF+k   L++g fvvF+++g+s f   v +f++
  XP_023888037.1  30 ETLRVGRLTIPKMFIRKYREN--LSSPTFLKLPNDAKWKVEL--TKCNDEVWLQKGWKEFAKCYSLEQGHFVVFRYEGNSHF--QVLIFDE 114
                     4456699***********766..55568889999********..**********************************9999..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MTYQSRRDHG NAPSDLIGKD SHFFKIILDE TLRVGRLTIP KMFIRKYREN LSSPTFLKLP  60
NDAKWKVELT KCNDEVWLQK GWKEFAKCYS LEQGHFVVFR YEGNSHFQVL IFDETATEID  120
CHSNSSHGRE DGKFDEKYIV PNMEDDESDS SVLTVLPCRG DLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-26B3 family protein