PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023888197.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 365aa MW: 40566.4 Da PI: 7.8184

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023888197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.1	1.2e-55	14	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv +++++ ++i+evd++k+ePw+Lp k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ XP_023888197.1 14 LPPGFRFHPTDEELITYYLLKKVLDSNFTG-RAIAEVDLNKCEPWELPDKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSS 107 79***********************999.89***********99999************************************97 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +lvg+kktLvfy+grapkgek++Wvmheyrle XP_023888197.1 108 kTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 142 45567**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MESYNYFDNN DAHLPPGFRF HPTDEELITY YLLKKVLDSN FTGRAIAEVD LNKCEPWELP 60 DKAKMGEKEW YFFSLRDRKY PTGLRTNRAT EAGYWKATGK DREIYSSKTC SLVGMKKTLV 120 FYRGRAPKGE KSNWVMHEYR LEGKFAYHYL SRSSKDEWVI SRVFQKSGSG TGGTASSGGS 180 GSKKTRLSSG ISLYQEPSSP SSVSISLPPL LDSSPYPTAR DGCSYDSPIA KEHVSCFSTI 240 AATTTAATSN NNFNPSFENF VAPQISNVDP FARFPRSLGV SAFPSLRSLQ ENLQLPFFFT 300 QQTMAPPPPQ QQQQPPQLHG GSAAELGLAG GTWPMQEDNS KDENGSGGCV RMGMGPTELD 360 CMWTY

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MESYNYFDNN DAHLPPGFRF HPTDEELITY YLLKKVLDSN FTGRAIAEVD LNKCEPWELP  60
DKAKMGEKEW YFFSLRDRKY PTGLRTNRAT EAGYWKATGK DREIYSSKTC SLVGMKKTLV  120
FYRGRAPKGE KSNWVMHEYR LEGKFAYHYL SRSSKDEWVI SRVFQKSGSG TGGTASSGGS  180
GSKKTRLSSG ISLYQEPSSP SSVSISLPPL LDSSPYPTAR DGCSYDSPIA KEHVSCFSTI  240
AATTTAATSN NNFNPSFENF VAPQISNVDP FARFPRSLGV SAFPSLRSLQ ENLQLPFFFT  300
QQTMAPPPPQ QQQQPPQLHG GSAAELGLAG GTWPMQEDNS KDENGSGGCV RMGMGPTELD  360
CMWTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-101	NAC family protein