PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023888397.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 220aa MW: 25757.9 Da PI: 6.5783

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023888397.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	137.1	1.2e-42	91	216	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 ppGfrF+Ptd +lv++yL +kv +++l+ + i +v++y++ P+ L + + ++k+wyfF++r++ky++gk+++ra+ +gyWkatg+d++++ XP_023888397.1 91 PPGFRFSPTDFDLVMHYLIRKVLNHPLPW-NRIVDVQLYDHSPEWLAeEYKQYGQKKWYFFTPRERKYRNGKHPSRAAGDGYWKATGTDTAIKF- 183 8**************************.77**********8334445889*********************************9. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 k+ +vg kk Lvf++g+apkg kt+W+m+eyr+ XP_023888397.1 184 KELVVGYKKKLVFHRGKAPKGDKTNWIMNEYRI 216 8999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MSLSPESSVE FNHEQKQQTL MVSDITTQVV PDINHTTHSS PSVVDHPDEE KLEEKKLQLE 60 EADELDLHGL LNDFDGGAEK EYHSFEHVEP PPGFRFSPTD FDLVMHYLIR KVLNHPLPWN 120 RIVDVQLYDH SPEWLAEEYK QYGQKKWYFF TPRERKYRNG KHPSRAAGDG YWKATGTDTA 180 IKFKELVVGY KKKLVFHRGK APKGDKTNWI MNEYRINHPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15500.1	5e-45	NAC family protein