PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023888589.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 831aa MW: 94840.5 Da PI: 7.0235

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023888589.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.5	9.7e-23	104	192	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA+++GFsvrk++ ++ g i++rtf+Cs+eg+r +k++ e+ + +++ +r+gC a+++ +++kdg ev +++++HnHe+ap XP_023888589.1 104 EFYKQYAHRMGFSVRKQYVRRG-SAGDIKRRTFCCSREGERVIDKRR-EQVSFHHPISRIGCLAQMTCQLQKDGMLEVVSFHEQHNHEFAP 192 6***************9998.6777************9999.9999**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 831 aa Download sequence
MQQPPISPDY MSIPPLHPLP PSLILPHSVS QSVDAAPVTS PPRTTTPTAP SFLSIIPDSD 60 KSNGSQFVQE EAPIDGSPNT PSKHKEIKAP TIGMKFDCDD SAYEFYKQYA HRMGFSVRKQ 120 YVRRGSAGDI KRRTFCCSRE GERVIDKRRE QVSFHHPISR IGCLAQMTCQ LQKDGMLEVV 180 SFHEQHNHEF APSPMKHMLR SNRKITPAQQ AFADDAEKSG VSIKQSIDLL SMQVGGYENL 240 GFLNVDYKNH VNSKRREALK RGDGRAVMDH FTKISIVDYG HFGDVICFDT TYRTNSYGRP 300 FAPFIGVNHH KQSIIFGAAL LYDETITSFK WLFETFLSAM SGKQPKTIFT DQSAAMANAI 360 EDVFPESNHR LCVWHIYQNA AKRLHHIFNS SSQFRNDFSN CVYDFEDENE WIVAWNNMLE 420 TYNLTDNPWL REMFDVKEKW CMVYGRHMFT ADMKSTQRSE SMNSVLKKYL KPKHGLLQFF 480 GHYSRVLSDK RSQELQAEFK MRQTTPVLLF DFEMLRDAAK LYTPEIFKMF QAEYVKIVDC 540 TIYKVSKSDS ITEYRVKYRN KTQEHLVKYE ASTTTVQCSC MKFSFLGILC SHALKVLDKK 600 NVKRIPAHYV LKRWTQDAKV GSIKDYRGID IKGSTQESVG KRLSHLSHKC LQINTLAAER 660 EMMYEHVDKC FDKLLQDLQE MRIKCCLSSM EGEVHGEVVP ENVLQGDGGF ESHADISQGI 720 YGIKTKPTVD SSANINSHKE HGNVEQPSQL VDNITQESFS CNNLVEQDNV VGLNGLNQES 780 FDCEFLVGQD NIVGLNGLNQ EYFDCEFLVG QDHVGLYDLN QVSVGSDIDN R

Sequence ? help Back to Top

Protein Sequence Length: 831 aa Download sequence

MQQPPISPDY MSIPPLHPLP PSLILPHSVS QSVDAAPVTS PPRTTTPTAP SFLSIIPDSD  60
KSNGSQFVQE EAPIDGSPNT PSKHKEIKAP TIGMKFDCDD SAYEFYKQYA HRMGFSVRKQ  120
YVRRGSAGDI KRRTFCCSRE GERVIDKRRE QVSFHHPISR IGCLAQMTCQ LQKDGMLEVV  180
SFHEQHNHEF APSPMKHMLR SNRKITPAQQ AFADDAEKSG VSIKQSIDLL SMQVGGYENL  240
GFLNVDYKNH VNSKRREALK RGDGRAVMDH FTKISIVDYG HFGDVICFDT TYRTNSYGRP  300
FAPFIGVNHH KQSIIFGAAL LYDETITSFK WLFETFLSAM SGKQPKTIFT DQSAAMANAI  360
EDVFPESNHR LCVWHIYQNA AKRLHHIFNS SSQFRNDFSN CVYDFEDENE WIVAWNNMLE  420
TYNLTDNPWL REMFDVKEKW CMVYGRHMFT ADMKSTQRSE SMNSVLKKYL KPKHGLLQFF  480
GHYSRVLSDK RSQELQAEFK MRQTTPVLLF DFEMLRDAAK LYTPEIFKMF QAEYVKIVDC  540
TIYKVSKSDS ITEYRVKYRN KTQEHLVKYE ASTTTVQCSC MKFSFLGILC SHALKVLDKK  600
NVKRIPAHYV LKRWTQDAKV GSIKDYRGID IKGSTQESVG KRLSHLSHKC LQINTLAAER  660
EMMYEHVDKC FDKLLQDLQE MRIKCCLSSM EGEVHGEVVP ENVLQGDGGF ESHADISQGI  720
YGIKTKPTVD SSANINSHKE HGNVEQPSQL VDNITQESFS CNNLVEQDNV VGLNGLNQES  780
FDCEFLVGQD NIVGLNGLNQ EYFDCEFLVG QDHVGLYDLN QVSVGSDIDN R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-117	FAR1 family protein