PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023888954.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 367aa    MW: 40883.9 Da    PI: 4.7999
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023888954.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.63.4e-18285318134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs+C++ kTp+WR gp g ktLCnaCG++y++ +
  XP_023888954.1 285 CSHCQVQKTPQWRTGPLGAKTLCNACGVRYKSGR 318
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MNVEMEYCVE ARALKSSLRG EILAMKTTTQ VFEDFRGSIG VGSEDFPVDD LLDLSNAEFE  60
DGYFVENEEE EEEEEKDFLS VSSSQDDENS NSNSNSNSNN FSGSADSEFT LASELAVPDD  120
DLAGLEWVSH FVDDSISEFS FLYPAGKQKT EANEMDRSEP ESRPVLDRAS RLQSPLEVPF  180
PSKARTKRSR ASNPVWSLAS SWFWDSNPGS PRTEDQTAPL SHKTHGFYDT SSLSSLSSSG  240
SCSSGLSSSP SFFNNMFNFV EPAKKKQKKK SAVQTGSGTQ FQRRCSHCQV QKTPQWRTGP  300
LGAKTLCNAC GVRYKSGRLF PEYRPACSPT FSGEIHSNSH RKVLEMRKRK ETVTEPESRL  360
NQMVSSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.23e-44GATA family protein