PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023888955.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 363aa    MW: 40410.3 Da    PI: 4.8548
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023888955.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.63.4e-18281314134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs+C++ kTp+WR gp g ktLCnaCG++y++ +
  XP_023888955.1 281 CSHCQVQKTPQWRTGPLGAKTLCNACGVRYKSGR 314
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MEYCVEARAL KSSLRGEILA MKTTTQVFED FRGSIGVGSE DFPVDDLLDL SNAEFEDGYF  60
VENEEEEEEE EKDFLSVSSS QDDENSNSNS NSNSNNFSGS ADSEFTLASE LAVPDDDLAG  120
LEWVSHFVDD SISEFSFLYP AGKQKTEANE MDRSEPESRP VLDRASRLQS PLEVPFPSKA  180
RTKRSRASNP VWSLASSWFW DSNPGSPRTE DQTAPLSHKT HGFYDTSSLS SLSSSGSCSS  240
GLSSSPSFFN NMFNFVEPAK KKQKKKSAVQ TGSGTQFQRR CSHCQVQKTP QWRTGPLGAK  300
TLCNACGVRY KSGRLFPEYR PACSPTFSGE IHSNSHRKVL EMRKRKETVT EPESRLNQMV  360
SSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.23e-44GATA family protein