PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023889068.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GeBP
Protein Properties Length: 276aa    MW: 30918.9 Da    PI: 8.8816
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023889068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57387.61.6e-2780174297
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                     +f+r+w+e Dei +LqGl+ + +++g s  +d++ f++++++s+s  ++ksql+eK+rrL+kKf+  +++ ++g +ps+ ++hd+  f+lsk++W
  XP_023889068.1  80 KFHRIWTEPDEIRFLQGLLHC-NSQGLSFPKDLHLFFDQFSNSMSQPYTKSQLSEKLRRLRKKFRVISARLARGLNPSMLSPHDRALFDLSKSLW 173
                     699******************.88999*99***************************************************************** PP

          DUF573  97 g 97 
                      
  XP_023889068.1 174 S 174
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MESTPTNPQP PPPLSIKSSP RKLPIKRKTP HHHADSSSSN PNPNFLSPKL ESPLDDESSP  60
AAAATAAAAA AAASRTPPFK FHRIWTEPDE IRFLQGLLHC NSQGLSFPKD LHLFFDQFSN  120
SMSQPYTKSQ LSEKLRRLRK KFRVISARLA RGLNPSMLSP HDRALFDLSK SLWSPQIQSF  180
DANADDDNDD EEENEEFCGG LGMGVVGAKA VLDVFDQCLK EVRAVLVRRG LLLSDNNKSS  240
SKAMDFESRW QEQRVAELDA FARRLRLVLD NSLRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.11e-17GeBP family protein