PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023889618.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 225aa    MW: 24686.7 Da    PI: 8.9495
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023889618.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.98e-212676256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g+
  XP_023889618.1 26 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRGA 76
                    69*******.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MAIKEKQLGV KKGSSIGKAT NEKEMHYRGV RKRPWGRYAA EIRDPGKKSR VWLGTFDTAE  60
EAARAYDAAA REFRGAKAKT NFPQPNEDLP INHSPSESST VESSSPDAPA RDATRRMESV  120
AESGVVVGRF PFLSQQQPYV GACAGVVGGF PVHSRPVLFF DPMVRPEFVA QSYPLRFDPS  180
PVEFNSGIVG GAQTQSDSDS SWVVDYKPRK EVLNLDLNLA PPMDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.14e-39ERF family protein