PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023890007.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 255aa    MW: 28148 Da    PI: 6.7906
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023890007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH438.1e-1471117354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h e+ErrRR+riNs +++Lr l+P a     kK++Ka+ L +++ ++k+L
  XP_023890007.1  71 KSHCEAERRRRARINSHLDTLRGLVPGA-----KKMDKASLLAEVISHMKEL 117
                     58*************************9.....9****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MEPFAWSSNT IAFGSDGLLN DELLVNSSMV RNGSDSSSSL VLDSERSQLV EARMKLERKG  60
GTAERTIAAL KSHCEAERRR RARINSHLDT LRGLVPGAKK MDKASLLAEV ISHMKELKRS  120
AEEASDGFVI PMDFDEVIVE REDGFDGDPY SIRASLCCDF KPGLLSDLKQ ALSGLHLIII  180
RAEIATLGGR MKNVLVMTNH KEGEVNHSEV RQALRSVLDK FSGSQEFLLG TTFSNKRQRI  240
SIFNCSSSSS LGDVW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.15e-34bHLH family protein