PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023890008.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 225aa MW: 25054.7 Da PI: 8.3496

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023890008.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.3	6.6e-14	41	87	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h e+ErrRR+riNs +++Lr l+P a kK++Ka+ L +++ ++k+L XP_023890008.1 41 KSHCEAERRRRARINSHLDTLRGLVPGA-----KKMDKASLLAEVISHMKEL 87 58***********************9.....9**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MEPFAWSSNT IAFGERSQLV EARMKLERKG GTAERTIAAL KSHCEAERRR RARINSHLDT 60 LRGLVPGAKK MDKASLLAEV ISHMKELKRS AEEASDGFVI PMDFDEVIVE REDGFDGDPY 120 SIRASLCCDF KPGLLSDLKQ ALSGLHLIII RAEIATLGGR MKNVLVMTNH KEGEVNHSEV 180 RQALRSVLDK FSGSQEFLLG TTFSNKRQRI SIFNCSSSSS LGDVW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G25710.1	2e-34	bHLH family protein