PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023890019.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 247aa    MW: 29204.9 Da    PI: 4.876
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023890019.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.99.4e-24161443128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     p frF+Ptd e+v +yL +k++g  l+ ++v+ e+d+y   + w+ +k +k +++ ++yfF+k +k +++g+r +r+t  g Wk   +dk++++ 
  XP_023890019.1  16 PWFRFRPTDVEIVEHYLYNKAHGLLLSSNDVLIECDLYGEkDSWSWRKYFKDSDEtSLYFFTKLKKVTTNGSRIQRTTPYGAWKPN-SDKPIYRD 109
                     679*************************9*******9965389**9976666544388**************************87.67999998 PP

             NAM  96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       k+ ++g  ++L +   +  k+   +Wvmhe+rl
  XP_023890019.1 110 kaKKDQIGFMRSLSYLPHKGFKSIIGRWVMHEFRL 144
                     677788**********99999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MTVDYGNEEE DDDLLPWFRF RPTDVEIVEH YLYNKAHGLL LSSNDVLIEC DLYGEKDSWS  60
WRKYFKDSDE TSLYFFTKLK KVTTNGSRIQ RTTPYGAWKP NSDKPIYRDK AKKDQIGFMR  120
SLSYLPHKGF KSIIGRWVMH EFRLAGILLC NKQYEDYVIC RIESQRDKEK EDRLIREVIQ  180
NEEHSVEIFE QQKDGGMTNT KFADDINDIK LDQLDAYVSS LEFASCPWEW DWAAINTTPS  240
TFMLPMP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04060.18e-18NAC family protein