PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023890065.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 187aa    MW: 21103.3 Da    PI: 4.731
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023890065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.42.4e-16243548
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++
   XP_023890065.1  2 TPQEERLVLELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 43
                     9*****************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MTPQEERLVL ELHSKWGNRW SRIARKLPGR TDNEIKNYWR THMRKKAQEE KQAMSPSPSS  60
SNCSSSSPSN PIVESLPFTE TGEKSFHDAG GPDIKASAEK QVEEEQGGEK GYSMDDIWKD  120
IKNTLIPGND GYTEEGSSFP CPTLDFPTWD QYHSESPWTM AEESKMFLPA CDHLFPCSDY  180
GTAYLSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.22e-39MYB_related family protein