PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023891036.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 551aa MW: 58476.1 Da PI: 10.1602

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023891036.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.7	1.4e-15	406	490	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC.................................TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkas..............................kapskKlsKaeiLekAveYIksLq 55 +r++h+ +E+ RR+riN+a+ e ++llPka+ +a + sKa+++e A eYI+ Lq XP_023891036.1 406 KRTSHKVAEQGRRNRINEALKEMQSLLPKAVvmkkeqqsgsdgspdaeargeedgkdskeeAAAKSNSSKAATVESANEYIRRLQ 490 7**************************999***********************97777777***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MASPAGTPQY NMQPEFTIPG AYFSPLTSPM LHAQNAQSAP RHQQPQRQQP QQGYYTNSST 60 APSSNATSPV DHQIADIDMA NAANTLSESA EGLLKKPTRR KIATPRSLAV NARLRSSPVQ 120 KAQKRKPGKL STSAENLVQE AQRASKLRPD SEALHLPSAF HGSSEDGSIS PEPLSESLMP 180 PPRRPTSGLP HSPLSITQSR DAKPGGLGAA ATPKSILSLR NGQPSAAQAV QAPAEPGNLD 240 DFRLPEAAAS QQSTLPRLNT RIIPAPSDES TPRASARKTP KLGPLSTPSS ARPSSAVQSP 300 SLNGSPMCGP LSGSSLVQKD SKTDGKGAKN TKKRGSSGAN SAMVSPALRP RISPSIKPLL 360 PEGTALHSPT HALLLASKSN YQNLLEGNHL PGVNYPDSLS TGLTSKRTSH KVAEQGRRNR 420 INEALKEMQS LLPKAVVMKK EQQSGSDGSP DAEARGEEDG KDSKEEAAAK SNSSKAATVE 480 SANEYIRRLQ REHAEKDMNM ARLQRKMDEL EKQLHGGQGG TGTGITEQEE EEEELPTANG 540 ATATMTDQSV R

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MASPAGTPQY NMQPEFTIPG AYFSPLTSPM LHAQNAQSAP RHQQPQRQQP QQGYYTNSST  60
APSSNATSPV DHQIADIDMA NAANTLSESA EGLLKKPTRR KIATPRSLAV NARLRSSPVQ  120
KAQKRKPGKL STSAENLVQE AQRASKLRPD SEALHLPSAF HGSSEDGSIS PEPLSESLMP  180
PPRRPTSGLP HSPLSITQSR DAKPGGLGAA ATPKSILSLR NGQPSAAQAV QAPAEPGNLD  240
DFRLPEAAAS QQSTLPRLNT RIIPAPSDES TPRASARKTP KLGPLSTPSS ARPSSAVQSP  300
SLNGSPMCGP LSGSSLVQKD SKTDGKGAKN TKKRGSSGAN SAMVSPALRP RISPSIKPLL  360
PEGTALHSPT HALLLASKSN YQNLLEGNHL PGVNYPDSLS TGLTSKRTSH KVAEQGRRNR  420
INEALKEMQS LLPKAVVMKK EQQSGSDGSP DAEARGEEDG KDSKEEAAAK SNSSKAATVE  480
SANEYIRRLQ REHAEKDMNM ARLQRKMDEL EKQLHGGQGG TGTGITEQEE EEEELPTANG  540
ATATMTDQSV R