PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023891084.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 374aa    MW: 39936.9 Da    PI: 4.4583
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023891084.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.65.3e-16227263135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_023891084.1 227 CQHCGVSEnnTPAMRRGPAGPRTLCNACGLMWANKGT 263
                     *******99*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MAAANPQPLQ ARPYGDHVAV RGPIPLEDDD EGEYEDGGGS GGGGGDDAMD DLEDSHVNSV  60
SVAEYGVGVG VGSGGGGGGG VGGGVVMASR TSELTLSFEG EVYVFPAVTP EKVQAVLLLL  120
GGRDVPTGVP TIEVPFNQNN RGVGETPKRS NLSRRIASLV RFREKRKERC FDKKIRYTVR  180
KEVAQRMHRK NGQFASVKEN SGASSWDSPQ SCLQDGTPRP ESVLRRCQHC GVSENNTPAM  240
RRGPAGPRTL CNACGLMWAN KGTLRDLSKG GRNVSMDHVE PETPVDVKPS ITDGEFCGNQ  300
DEQEAPEDPS KPVTEGTNKS SVNPDEEDLH DTAVDFSDLP MGLVHSSVND EEQEPLVELP  360
NPSDTDIDIP ANFD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145150ETPKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.23e-74GATA family protein