PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023891111.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 277aa    MW: 30393 Da    PI: 7.0478
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023891111.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00022101123123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_023891111.1 101 FSCNYCQRKFYSSQALGGHQNAH 123
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MEPTKNELCM SNPPSNFSAP EGPPCPNTPL QNQKENKLQR VEEEEEEKEI KSDILLDLNL  60
SSKDSNHGSE AELNLIDCLE VGSSQNPSET PQTSSAEPRI FSCNYCQRKF YSSQALGGHQ  120
NAHKRERTLA KREQKIGAHM MASAAAFGRS IDHDHYPSLA SLPLHGAYNR SLGIQAHSMI  180
QKPSHASSCS GFFGPRSWSR PPFINQQPAI GKLGVENFHV TAASQSRASV GRFEVVRAMN  240
GSLANDELSG YWLAGSGGGL FKPNQEEMKK LDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.12e-49C2H2 family protein