PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023891176.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 784aa MW: 89885.5 Da PI: 6.7178

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023891176.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100.5	1.7e-31	77	168	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk++++gkw+v+ ++ eHnHel+p XP_023891176.1 77 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRtkDREIKRPRTITRVGCKASLSVKMQDSGKWVVSGFVREHNHELVP 168 9*************************************998888545677889*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 784 aa Download sequence
MDNEMIEFDI GLGSGGGDDD GVDMDDEEMV DSPTHITTSG GGGAGTSSEL YLPEGDLLDL 60 EPYEGMEFES EEAAKAFYNS YARRVGFSTR VSSSRRSRRD GAIIQRQFVC AKEGFRNLNE 120 KRTKDREIKR PRTITRVGCK ASLSVKMQDS GKWVVSGFVR EHNHELVPPD QVHCLRSHRQ 180 ISGPAKTLID TLQAAGMGPR RIMSALIKEY GGISKVGFTE VDCRNYMRNN RQRSLEGDIQ 240 LVLDYLRQMH AENPNFFYAV QGDEDQSMSN VFWADPKARL NYTYFGDTVT FDTTYRSNRY 300 RLPFAPFTGI NHHGHPVLFG CAFLINESEA SFVWLFNTWL VAMSGRPPVS ITTDHDAVIR 360 SAITQVFPET RHRFCKWHIF KKCQEKLSHV FLKHPNFEAD FHKCVNLTEL IEEFESCWLS 420 LLDRYDLRDH EWLQTIYSAR RQWVPVYLRD TFFAEMSITQ RSDSMNSYFD GYVNASTNLS 480 QFFKLYEKAL ESRNEKEVKA DYDTMNTAPI LKTPSPMEKQ ASELYTRKLF VRFQEELVGT 540 LTFMASKAED DGEVITYQVS KFGEDHKAYY VKFNVLEMKA TCSCQMFEFS GLLCRHILAV 600 FRVTNVLTLP SHYILKRWTR NAKSSVILEE RTSDVYTNYL ESHTVRYNTL RHEVFKFVDE 660 GAKALETYDV AMGALQVAAK KLSHATKNEG KTGMANGRVK GNLATDGSRT NCTTDDLERC 720 SGQHLSEDDM DRRIRELTNE LESANRKCEV YRANLLSVLK DIEDHKQQLS IKVQNIKISM 780 KDGL

Sequence ? help Back to Top

Protein Sequence Length: 784 aa Download sequence

MDNEMIEFDI GLGSGGGDDD GVDMDDEEMV DSPTHITTSG GGGAGTSSEL YLPEGDLLDL  60
EPYEGMEFES EEAAKAFYNS YARRVGFSTR VSSSRRSRRD GAIIQRQFVC AKEGFRNLNE  120
KRTKDREIKR PRTITRVGCK ASLSVKMQDS GKWVVSGFVR EHNHELVPPD QVHCLRSHRQ  180
ISGPAKTLID TLQAAGMGPR RIMSALIKEY GGISKVGFTE VDCRNYMRNN RQRSLEGDIQ  240
LVLDYLRQMH AENPNFFYAV QGDEDQSMSN VFWADPKARL NYTYFGDTVT FDTTYRSNRY  300
RLPFAPFTGI NHHGHPVLFG CAFLINESEA SFVWLFNTWL VAMSGRPPVS ITTDHDAVIR  360
SAITQVFPET RHRFCKWHIF KKCQEKLSHV FLKHPNFEAD FHKCVNLTEL IEEFESCWLS  420
LLDRYDLRDH EWLQTIYSAR RQWVPVYLRD TFFAEMSITQ RSDSMNSYFD GYVNASTNLS  480
QFFKLYEKAL ESRNEKEVKA DYDTMNTAPI LKTPSPMEKQ ASELYTRKLF VRFQEELVGT  540
LTFMASKAED DGEVITYQVS KFGEDHKAYY VKFNVLEMKA TCSCQMFEFS GLLCRHILAV  600
FRVTNVLTLP SHYILKRWTR NAKSSVILEE RTSDVYTNYL ESHTVRYNTL RHEVFKFVDE  660
GAKALETYDV AMGALQVAAK KLSHATKNEG KTGMANGRVK GNLATDGSRT NCTTDDLERC  720
SGQHLSEDDM DRRIRELTNE LESANRKCEV YRANLLSVLK DIEDHKQQLS IKVQNIKISM  780
KDGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein