PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023891209.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 227aa    MW: 25676.5 Da    PI: 4.6486
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023891209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.7e-1994143355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ +g+++AeIrd + ng   r+++g+f+tae Aa a+++a+ +++g
  XP_023891209.1  94 YRGVRRRP-WGKYAAEIRDSTRNG--VRVWIGTFDTAEAAALAYDQAAFAMRG 143
                     9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MDSSFYQNPY PEFSSSSSFN SSESLSCNNY MPNFENQYLP FNENDTQEML LYGVLAEVTK  60
DSSETASSVH VKDHEEVNSR ANEGGEPMKE EISYRGVRRR PWGKYAAEIR DSTRNGVRVW  120
IGTFDTAEAA ALAYDQAAFA MRGSMAVLNF PEEMVKESLK KMNYGHEEGC SPVLELKKRH  180
SLKKKSKSKK KKEEEINSGL ENMVVFEDLG ADYLEELLNI SESASPE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177192KKRHSLKKKSKSKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-48ERF family protein