PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023891300.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB
Protein Properties Length: 311aa    MW: 35235.4 Da    PI: 6.7397
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023891300.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.34.7e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +l  +++++G  +W + +r  g+ R++k+c++rw +yl
   XP_023891300.1 14 KGAWTPEEDGKLRSYIHRYGHSNWCKLPRLAGLSRCGKSCRLRWVNYL 61
                     79********************************************97 PP
2Myb_DNA-binding51.22.9e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+eE++l+ +++++ G++ W+ Ia+ +  gRt++++k++w+++l
   XP_023891300.1  67 RGNFTKEEEDLIFKLHEEAGNK-WSMIAKNLS-GRTDNEIKNHWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MVRGPFYDKN GLKKGAWTPE EDGKLRSYIH RYGHSNWCKL PRLAGLSRCG KSCRLRWVNY  60
LQPGVKRGNF TKEEEDLIFK LHEEAGNKWS MIAKNLSGRT DNEIKNHWHT HLKKHVKKIA  120
KTSQRKAKKI KESESESLRA SCSPNQSLES SPLTTELSSS KLSSLSCDNS TVIGTNWTEE  180
DSLSSLETSQ NSLENMDLKK YSKKTLKTES LHANDPFHHI LESSPLSPEV SSAKFSSLGS  240
DHSSIPGINW IEEDVLASFE TLDAAFGDFW TEPFIADNIY IPDELPISPY VSYYDDGTDL  300
FDQVMQELPK N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65230.18e-53MYB family protein