PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023891371.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 251aa    MW: 27265.2 Da    PI: 7.3263
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023891371.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.0002879101123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC+ C+k F++   L  H  +H
  XP_023891371.1  79 YKCSVCNKAFPSYQALGGHKASH 101
                     9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MALEALNSPT TPTPFSFEDM EHQQYPEPWA KKKRSKRPRF ENPTTEEEYL ALCLIMLARG  60
GGDAATTSTS EPPTLKLSYK CSVCNKAFPS YQALGGHKAS HRKSAAESAT ATAAAANENN  120
NHHTSTSSTS GRTHECSICH KTFPTGQALG GHKRCHYEGG NSANTNTNSN NNNTVAAASS  180
GVTFSEGGGS TQSHRDFDLN LPALPDFWTD KKISTNIHQL LVEQEVESPL PTKKPRLLLM  240
NQEDMIVSSQ Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-50C2H2 family protein