PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023891811.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 258aa    MW: 28586.1 Da    PI: 5.1057
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023891811.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.3e-1872122155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +  +++Wv+e+r+p++   ++r++lg++ t+e+Aa+a++ a++ l+g
  XP_023891811.1  72 PVYRGVRKRN-KNKWVCEVREPKK---KTRIWLGTYPTPEMAARAHDVAALFLRG 122
                     68*****888.7*********854...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MNIFSQYSDP YPFGSNSFSF DKAETSSLSD AGSGTSASTH KGARYSDDEV ILASRTPKKC  60
AGRRVFKETR HPVYRGVRKR NKNKWVCEVR EPKKKTRIWL GTYPTPEMAA RAHDVAALFL  120
RGKSACLNFA DSAWRLRMPA SKDAMDIRRA AAEAAEAFRP REFGGECGVG RGDDDEEVKN  180
CEEVLGSCGE SAVVEKKASV QENVVYFDEE ELYDMPGLLV NMAEGLLISP PPCVGDSNSI  240
DWDDMEIDAQ LSLWSFGV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17895RKRNKNKWVCEVREPKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.13e-60ERF family protein